MCP servers and skills: search, filter by where they run, and compare.
Nothing matches every word exactly, so these are the closest matches.
Run DiffDock molecular docking via NVIDIA NIM to predict small-molecule binding poses against protein targets. Use for DiffDock, molecular docking, ligand docking, blind docking, SMILES or SDF ligands
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Run RFDiffusion protein backbone design via NVIDIA NIM. Use for de novo protein backbones, motif scaffolding, binder design, hotspot residues, contigs syntax, diffusion steps, hosted NVIDIA API calls,
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Generate multiple sequence alignments (MSAs) for protein sequences using the ColabFold MSA-Search NIM. Use for homolog search, UniRef30/ColabFold env searches, A3M or FASTA alignments, paired MSA sear
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Use this skill for OpenFold3, NVIDIA's BioNeMo NIM microservice for biomolecular structure prediction. Invoke whenever the user mentions OpenFold3 or needs protein, protein-ligand, protein-DNA/RNA, or
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Use Boltz2 NIM for biomolecular structure prediction and binding affinity. Invoke for Boltz2, protein structures, protein-ligand/DNA/RNA complexes, SMILES or CCD ligands, pIC50/IC50 affinity scoring,
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Generate novel drug-like molecules using the GenMol NIM microservice. Use for de novo generation, scaffold decoration, motif extension, lead optimization, SAFE notation, QED or LogP ranking, hosted NV
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Use this skill for MolMIM, NVIDIA's BioNeMo NIM microservice for small-molecule latent-space generation and optimization. Invoke for MolMIM, molecular embeddings, hidden states, latent decoding, sampl
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Use this skill for OpenFold2, NVIDIA's BioNeMo NIM microservice for monomer protein structure prediction. Invoke whenever the user mentions OpenFold2, AlphaFold2-like monomer folding, protein sequence
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
Generate and analyze DNA sequences using NVIDIA's Evo 2 BioNeMo NIM microservice. Use for Evo2/Evo 2, DNA generation, genomic sequence generation, hosted generation, local Docker deployment, local for
OfficialSkillApache-2.0 AND CC-BY-4.0★ 3.6k in collectionNo key
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