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skill-commons

Git-first hub for open, reusable research Agent Skills

skill-commons/skill-commonscommunitylistedunreviewed

Set up

Skills are installed by placing their folder where your agent loads skills.

The download comes from github.com/skill-commons/skill-commons itself, not from our server, so what you get is exactly what its author published.

Install instructions come from the README

Skills do not use an MCP config. Follow the steps in the README below.

README

synced Oct 26, 2026

Skill Commons

Skill Commons is a federated discovery catalog for research skills. It records where each skill is maintained; it does not copy third-party skill content into this repository.

The canonical skill bytes, references, scripts, history, and updates remain in their source repositories. The first Commons-maintained source is the curated-research-skills Hermes tap.

Use with Hermes

Subscribe to the Commons-maintained tap:

hermes skills tap add skill-commons/curated-research-skills
hermes skills search astronomy

Every table below also gives the explicit direct-install command. Hermes installs from the source repository's current default branch and records its resolved source and content hash locally.

Review maturity summarizes accountable assessment under a named policy. It is not a global trust badge, scientific-validity claim, or runtime authorization. See ADR 0003.

Skills

General

Literature discovery, evidence synthesis, monitoring, and scientific calculation.

SkillVersionReviewDescriptionSourceInstall
arxiv2.0.0curatedSearch, read, cite, and monitor papers through arXiv.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/arxiv
calculator1.0.2curatedPerform exact symbolic and numerical calculations.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/calculator
research-paper-evidence-workflow1.0.1curatedMap research-paper claims to evidence; audit draft scope. Map claims to supplied evidence, synthesize completed results, construct an evidence-backed outline, and audit a draft for traceability, numeric fidelity, scope, and overclaiming. Use when notes, tables, figures, result files, or a manuscript need a claim-evidence matrix, results narrative, outline, or evidence-focused review. Do not use to design or run experiments, retrieve citations, format or compile LaTeX, manage projects, submit or promote papers, or perform external writes.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/research-paper-evidence-workflow
rss-feed-monitor2.0.1curatedMonitor RSS and Atom feeds in an isolated local database. Scan for new articles and manage read state with explicit mutation safeguards.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/rss-feed-monitor

LaTeX

Research-manuscript authoring, revision, compilation, and submission packaging.

SkillVersionReviewDescriptionSourceInstall
latex-journal-submission-package2.0.0curatedBuild and verify portable LaTeX journal submissions.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/latex-journal-submission-package
latex-research-paper1.0.0curatedDraft, revise, and verify LaTeX research manuscripts.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/latex-research-paper

Astronomy

Astronomy catalog access, survey-specific workflows, and scientific visualization.

SkillVersionReviewDescriptionSourceInstall
astro-catalog-plotting-cache2.0.1curatedCreate cached, publication-ready astronomy catalog plots.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/astro-catalog-plotting-cache
cluster-cmd-isochrone-fit1.0.1curatedFit cluster CMD ages with stellar-evolution isochrones.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/cluster-cmd-isochrone-fit
coseecat1.0.0curatedQuery solar electron events and plots from CoSEE-Cat.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/coseecat
gaia-dr3-tap-query3.1.1curatedQuery Gaia DR3 catalogs and spectra at AIP.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/gaia-dr3-tap-query
muse-science-products1.0.0curatedPlot published MUSE maps and H II region measurements.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/muse-science-products
pepsi-spectra1.0.1curatedRetrieve and plot public PEPSI stellar spectra.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/pepsi-spectra
rave-dr62.1.1curatedQuery and plot public RAVE DR6 spectra and catalogs.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/rave-dr6
starhorse-access2.0.3curatedAccess StarHorse SHboost and SH21 catalog products.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/starhorse-access
tap-pyvo-adql-access1.0.1curatedQuery astronomy TAP services with PyVO and ADQL.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/tap-pyvo-adql-access
vamdc1.0.0communityQuery atomic and molecular spectroscopic data using the pyVAMDC command-line tool. Provides access to VAMDC (Virtual Atomic and Molecular Data Centre) infrastructure for retrieving spectral lines, species metadata, node information, and RADEX molecular collision data. Use this skill to fetch spectroscopic data from various databases, discover available species, count results before downloading, or obtain collision rate files for radiative transfer modelling.pinned sourcehermes skills install VAMDC/pyVAMDC/skill

Data

Reproducible access to large research datasets and object storage.

SkillVersionReviewDescriptionSourceInstall
data-aip-de-s32.0.1curatedAccess and cache research data from S3-compatible stores.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/data-aip-de-s3
drphub-cards2.1.3communityManage and publish DRP Hub research products via REST. Supports full CRUD, clone, maturity, publish, audit, lineage, human-review, bookmarks, likes, sharing, and SSE event streaming against the production API at drp-term.kube.aip.de/api/v1/.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/drphub-cards
drphub-products1.0.1curatedInspect Digital Research Product Hub products and health. Report API capabilities, product summaries, maturity, and lineage through a bounded read-only REST client. Use when a user needs to diagnose a DRP Hub endpoint, search or inspect products, verify immutable Git and image identities, or review maturity and clone relationships without creating, changing, publishing, sharing, reviewing, or deleting remote data.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/drphub-products

Visualization

General-purpose publication and report graphics.

SkillVersionReviewDescriptionSourceInstall
large-tabular-visualization2.0.2curatedVisualize large tabular data with hvPlot and Datashader. Build interpretable interactive or static plots for datasets too dense or too large for ordinary point plotting.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/large-tabular-visualization
seaborn-paper-plots1.0.2curatedCreate reproducible publication plots with Seaborn.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/seaborn-paper-plots

Scientific Computing

Simulation, validation, and reproducible scientific software workflows.

SkillVersionReviewDescriptionSourceInstall
dt4acc-host-smoke-test2.0.1curatedSmoke-test local dt4acc checkouts without any containers. Run a bounded, simulation-only host check for dt4acc, dt4acc-lib, and lat2db without facility services.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/dt4acc-host-smoke-test
dt4acc-operations1.0.1curatedOperate local dt4acc simulations from digest-pinned SIFs. Preflight, plan, start, inspect, and stop a simulation packaged as an already-built Apptainer SIF. Use when an operator needs a bounded simulation IOC lifecycle with exact source/build provenance, a clean child environment, no host or facility network, content-bound start/stop confirmation, and exact owned-process cleanup. This CRS skill never builds or pulls images, connects to facility services, accesses live PVs, imports MongoDB data, or performs PV writes.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/dt4acc-operations
jubik-bootstrap1.0.1curatedBootstrap a pinned J-UBIK CPU core and verify readiness. Preflight, plan, create, and diagnose its environment with an isolated lock-backed, wheel-only workflow and a genuine synthetic SkyModel smoke test. Use when a researcher is blocked on J-UBIK installation, JAX/NIFTy compatibility, environment configuration, artifact provenance, or core readiness. This skill proves only the CPU core; it never claims JWST, Chandra, or eROSITA adapter readiness, downloads calibration or observation data, invokes instrument software, or runs research inference.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/jubik-bootstrap
nifty-re-variational-inference1.0.1curatedRun bounded Bayesian variational inference with NIFTy.re. Build and validate workflows with the JAX-based NIFTy.re API. Use when a researcher needs to formulate priors, a response and likelihood, prove a NIFTy.re installation against an analytic posterior, run a small CPU pilot, inspect optimizer and sampling evidence, or prepare a reproducible inference handoff. Do not use this skill to bootstrap J-UBIK, configure telescope instruments, certify an arbitrary scientific model from one successful run, or launch unbounded production inference.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/nifty-re-variational-inference
reana-operator1.0.1curatedInspect remote REANA workflows using read-only commands. Use a fixed allowlist against an authenticated service to report connectivity, cluster information, workflow inventory, status, redacted logs, workspace files, and disk usage. Use when a user wants to diagnose or review remote REANA state after a local workflow has been authored. This CRS skill never uploads, creates, starts, stops, deletes, downloads, shares, or otherwise mutates a workflow.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/reana-operator
reana-workflow-authoring1.0.1curatedAuthor and validate local REANA Serial workflow projects. Scaffold and edit provider-neutral projects while checking reana.yaml structure, declared inputs and outputs, runtime-image reproducibility, path containment, symlinks, and accidental secrets. Use when a user asks to create or review a local REANA workflow definition before operational handoff. This skill never authenticates, contacts a REANA server or registry, uploads, submits, starts, monitors, downloads, or mutates a remote workflow.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/reana-workflow-authoring

Software Development

Documentation-grounded software development and library workflows.

SkillVersionReviewDescriptionSourceInstall
python-library-docs-first2.0.1curatedVerify Python APIs against version-matched documentation. Check version-sensitive third-party APIs against authoritative documentation before writing, reviewing, fixing, or explaining code.pinned sourcehermes skills install skill-commons/curated-research-skills/skills/python-library-docs-first
Former skillUse insteadReason
cold-streams-monitoringarxivA topic-specific arXiv query and scheduler wrapper is covered by generic monitoring.
iterative-paper-improvementlatex-research-paperIts revision rounds duplicate the canonical manuscript workflow.
latex-paper-iterationlatex-research-paperDrafting, revision, merging, figures, and compile loops belong in one authoring skill.
multi-section-latex-whitepaperlatex-research-paperMulti-source synthesis is a mode of the canonical manuscript workflow.
mnras-latex-compile-portability-fixeslatex-journal-submission-packageMNRAS portability fixes are packaging guidance, not a separate task.
mnras-latex-portablelatex-journal-submission-packageMNRAS build guidance is consolidated into the journal submission skill.
mnras-latex-portable-build-and-packagelatex-journal-submission-packageThis duplicated the canonical journal build and submission workflow.
cmd-plottingastro-catalog-plotting-cacheA color-magnitude diagram is one plot type in the broader astronomy plotting skill.
datashader-019-pipelineastro-catalog-plotting-cacheDatashader is one implementation path in the broader catalog plotting workflow.
gaia-dr3-daiquiri-restgaia-dr3-tap-queryDaiquiri REST is retained as a fallback in the canonical Gaia access skill.
gaia-dr3-plot-with-dustastro-catalog-plotting-cacheOne Gaia sample and dust-overlay figure is too narrow to be an independent skill.
rave-dr6-nearest-100-plotrave-dr6A fixed nearest-100 query is an example, not a distinct RAVE capability.
rave-dr6-public-talk-visualizationsastro-catalog-plotting-cachePresentation styling is a plotting choice independent of the RAVE data source.
rave-dr6-recent-observations-plotrave-dr6A fixed newest-100 query and plot is covered by general RAVE querying and plotting.
rave-dr6-shboost-distance-queryrave-dr6The reusable RAVE-StarHorse crossmatch is part of the canonical RAVE skill.
rave-dr6-starhorse-accessrave-dr6This was a second version of the same RAVE-StarHorse crossmatch workflow.
hdf5-on-s3-cacheddata-aip-de-s3Cache-first HDF5 handling is one path within general object-store access.
s3-parquet-samplingdata-aip-de-s3Parquet projection, reduction, and caching are core object-store operations.
s3-parquet-sampling-plot-cacheddata-aip-de-s3S3 access belongs here; astronomy plotting belongs in the plotting skill.
dask-hvplot-datashader-scientific-plotslarge-tabular-visualizationThe implementation-specific plotting workflow is now maintained as a general large-table visualization skill.
blogwatcherrss-feed-monitorRSS and Atom monitoring is maintained under a tool-independent task name.
dtwin-host-smoke-testdt4acc-host-smoke-testThe canonical name identifies the dt4acc stack and its simulation-only scope.
python-mcp-docs-firstpython-library-docs-firstPython documentation research no longer requires a specific MCP provider.
dask-mcp-docs-firstpython-library-docs-firstDask documentation research is one use of the provider-neutral Python workflow.
pandas-datashader-mcp-docs-firstpython-library-docs-firstpandas and Datashader documentation research is one use of the provider-neutral Python workflow.
research-paper-writingresearch-paper-evidence-workflowEvidence mapping, completed-result synthesis, outlining, and claim review are maintained as a focused read-only workflow; operational project management and submission actions remain excluded.
reana-aipreana-workflow-authoringReusable local REANA authoring guidance is maintained without AIP-only endpoints, credentials, or remote operations.
reana-cmd-plot-workflow-external-scriptreana-workflow-authoringAn external-script plotting workflow is an example covered by the general Serial authoring workflow.
reana-dev-workflow-setupreana-workflow-authoringLocal workflow setup and validation belong in the canonical REANA authoring skill.
reana-run-script-with-workspacereana-workflow-authoringRunning a script against declared workspace inputs is a Serial authoring pattern, not a separate skill.
reana-serial-pythonreana-workflow-authoringA Python Serial workflow is covered by the provider-neutral canonical authoring workflow.
reana-serial-python-analysis-templatereana-workflow-authoringThe analysis template is consolidated into the general local scaffolding workflow.
reana-workflow-best-practicesreana-workflow-authoringREANA authoring best practices are maintained directly in the canonical workflow.

How the registry works

  • registry/index.yaml records each canonical repository, path, tracked branch, last reviewed commit, and Git tree.
  • categories/index.yaml supplies the human taxonomy. Categories are not Hermes installation units.
  • catalog/index.json is the generated machine view.
  • skill-commons check-upstreams compares the recorded directory trees with the tracked branches and reports upstream changes without copying them.

The YAML files above are implementation data for this catalog, not a new skill-package standard. Source repositories use the formats understood by their clients; the Commons-maintained tap follows current Hermes conventions.

See CONTRIBUTING.md to register or update a source and docs/FEDERATED_REGISTRY.md for the architecture.

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