MCP servers and skills: search, filter by where they run, and compare.
1–24 of 42 tools for “ucsc-genome”
Clear allNothing matches every word exactly, so these are the closest matches.
UCSC Genome Browser REST API — reference genome assemblies for ~250 species, the annotation tracks on each (genes, variants, conservation, regulation), the rows of any track over a region, and raw DNA
Hosted by authorMITFew starsNo key
An AI-driven genomic intelligence system delivering structured ClinVar interpretation and high-precision exon, intron, and gene queries using the Model Context Protocol (MCP).
PythonMIT★ 18No key
Auditable memory layer for AI agents: zero-LLM-call local ingest (~10ms/msg, air-gapped), matches Mem0 on accuracy at ~1000x lower ingest cost, bi-temporal belief-state, MCP server. Honest LoCoMo/Long
PythonApache-2.0★ 10No key
Audited, reproducible analysis of consumer genotyping-array data into a bilingual HTML report; an agent skill for Claude Code / Codex
SkillLink only★ 7
Your genome, labs, prescriptions and wearables sit in silos that never compare notes, so contradictions go unnoticed. This reads them against each other, with the source behind every answer — one loca
SkillApache-2.0★ 4Few starsNo key
MCP server and Claude Code plugin for the ENCODE Project: search, download and analyze ChIP-seq, ATAC-seq, RNA-seq, WGBS, Hi-C and CUT&RUN data with 20 tools, 47 skills and 7 Nextflow pipelines
Node.jsAGPL-3.0★ 21No key
MGnify — EMBL-EBI's metagenomics resource: public microbiome studies, the biome vocabulary they are classified under, and the ~57,000 MAGs and isolate genomes in its species-level genome catalogues, w
Hosted by authorMITFew starsNo key
GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.
Hosted by authorMITFew starsNo key
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service: which assemblies exist for an organism and how good they are, where a gene sits on the genome and wha
Hosted by authorMITFew starsNo key
SkillApache-2.0★ 3Few starsNo key
Open-source (MIT) Python library and local MCP server that turns any agent file into deterministic, content-addressed brain artifacts. Hosted API: verdigraph.dev (25% of net revenue funds conservation
Hosted by authorMIT★ 1Few starsNo key
AI-agent-controllable desktop genome and transcriptome viewer. Native MCP server (43 tools) and embedded HTTP API let LLM assistants observe, drive, and analyse alongside the user. OpenGL rendering, 5
MCPLink only★ 4Few stars
AI-powered codebase intelligence platform — MCP Server, AST analysis, Knowledge Graph, and semantic memory with SQLite + sqlite-vec. Analyze any codebase in minutes.
Node.jsMIT★ 12No key
Local-first MCP server for AI-powered codebase intelligence — AST analysis, dependency graphs, and semantic search. Your source code never leaves your machine.
Node.jsMIT★ 10No key
The complete end-to-end frontend engineering and design orchestrator for AI agents and developers. 16 pillars, MCP server, 3D WebGL, typography, motion, and automated QA.
Node.jsMIT★ 1Few starsNo key
Capture a live webpage's design system, motion, and interaction state machines, then reconstruct it as verified React — with per-node pixel verification and an honest skip-reason taxonomy.
SkillMIT★ 4Few starsNo key
Rotifer Protocol MCP Server — Model Context Protocol integration for AI agents
Node.jsApache-2.0★ 1Few starsNo key
Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation
Hosted by authorMITFew starsNo key
An MCP server that acts as a central memory system and workflow guardian for AI agents, featuring knowledge graph capabilities and autonomous guidance prompts.
SkillMIT★ 3Few starsNo key
HGNC (HUGO Gene Nomenclature Committee) MCP.
Hosted by authorMITFew starsNo key
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
Hosted by authorMITFew starsNo key
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